Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AC010141.1-201ENST00000411585 623 ntBASIC14.7□□□□□ -0.06
RIF1Q5UIP0 CTBP2P6-201ENST00000526402 1229 ntBASIC14.7□□□□□ -0.06
RIF1Q5UIP0 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AC009560.1-201ENST00000620208 434 ntBASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 E2F3P2-201ENST00000447755 1422 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AL109809.1-201ENST00000418979 1367 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AL929302.1-201ENST00000426556 871 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AC084262.1-201ENST00000567818 751 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AP005264.6-204ENST00000588436 719 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 NHP2P1-201ENST00000335274 462 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.69□□□□□ -0.06
RIF1Q5UIP0 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RIF1Q5UIP0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 MIR566-201ENST00000385187 94 ntBASIC14.68□□□□□ -0.06
RIF1Q5UIP0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.68□□□□□ -0.06
RIF1Q5UIP0 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms