Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col1a2Q01149 Gm24891-201ENSMUST00000104391 136 ntBASIC15.33■□□□□ 0.04
Col1a2Q01149 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Col1a2Q01149 Gm15432-201ENSMUST00000121106 195 ntBASIC15.33■□□□□ 0.04
Col1a2Q01149 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col1a2Q01149 Gm9550-201ENSMUST00000161130 862 ntBASIC15.33■□□□□ 0.04
Col1a2Q01149 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col1a2Q01149 Gm37835-201ENSMUST00000193305 361 ntBASIC15.33■□□□□ 0.04
Col1a2Q01149 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.33■□□□□ 0.04
Col1a2Q01149 Mir7686-201ENSMUST00000200604 57 ntBASIC15.33■□□□□ 0.04
Col1a2Q01149 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col1a2Q01149 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.33■□□□□ 0.04
Col1a2Q01149 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col1a2Q01149 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col1a2Q01149 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col1a2Q01149 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col1a2Q01149 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Col1a2Q01149 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12616-201ENSMUST00000118594 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12624-201ENSMUST00000177615 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12621-201ENSMUST00000177760 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm4310-201ENSMUST00000177847 889 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12615-201ENSMUST00000177970 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12622-201ENSMUST00000177975 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12627-201ENSMUST00000178412 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12625-201ENSMUST00000179122 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12614-201ENSMUST00000179586 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm12613-201ENSMUST00000180323 382 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.32■□□□□ 0.04
Col1a2Q01149 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.32■□□□□ 0.04
Col1a2Q01149 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col1a2Q01149 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.31■□□□□ 0.04
Col1a2Q01149 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.31■□□□□ 0.04
Col1a2Q01149 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Gm13809-201ENSMUST00000117921 597 ntBASIC15.31■□□□□ 0.04
Col1a2Q01149 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.31■□□□□ 0.04
Col1a2Q01149 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Gm29787-201ENSMUST00000222129 849 ntBASIC15.31■□□□□ 0.04
Col1a2Q01149 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.31■□□□□ 0.04
Col1a2Q01149 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col1a2Q01149 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col1a2Q01149 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.3■□□□□ 0.04
Col1a2Q01149 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Col1a2Q01149 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.3■□□□□ 0.04
Col1a2Q01149 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col1a2Q01149 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.3■□□□□ 0.04
Col1a2Q01149 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Col1a2Q01149 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col1a2Q01149 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms