Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CXCR4P61073 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCR4P61073 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.1□□□□□ -0.15
CXCR4P61073 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCR4P61073 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCR4P61073 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CXCR4P61073 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.1□□□□□ -0.15
CXCR4P61073 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CXCR4P61073 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CXCR4P61073 AL136982.4-201ENST00000437689 1740 ntBASIC14.1□□□□□ -0.15
CXCR4P61073 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 AC067750.1-201ENST00000608826 6545 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CXCR4P61073 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 AC112191.1-201ENST00000523689 701 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCR4P61073 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CXCR4P61073 PDPK2P-202ENST00000562415 1191 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 AC034105.1-201ENST00000563488 319 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCR4P61073 RARRES2P8-201ENST00000566335 367 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 AP002472.1-201ENST00000577490 586 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCR4P61073 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.09□□□□□ -0.15
CXCR4P61073 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 FOXO1B-201ENST00000504678 1527 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CXCR4P61073 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.09□□□□□ -0.15
CXCR4P61073 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CXCR4P61073 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CXCR4P61073 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.09□□□□□ -0.15
CXCR4P61073 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CXCR4P61073 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.09□□□□□ -0.15
CXCR4P61073 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCR4P61073 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCR4P61073 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCR4P61073 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCR4P61073 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CXCR4P61073 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CXCR4P61073 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CXCR4P61073 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CXCR4P61073 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.08□□□□□ -0.16
CXCR4P61073 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 AC145285.3-201ENST00000564603 959 ntBASIC14.08□□□□□ -0.16
CXCR4P61073 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.08□□□□□ -0.16
CXCR4P61073 AC099522.2-201ENST00000607001 744 ntBASIC14.08□□□□□ -0.16
CXCR4P61073 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CXCR4P61073 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 HLA-A-201ENST00000376802 1334 ntBASIC14.08□□□□□ -0.16
CXCR4P61073 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.08□□□□□ -0.16
CXCR4P61073 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CXCR4P61073 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCR4P61073 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.08□□□□□ -0.16
CXCR4P61073 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms