Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.79■□□□□ 0.6
TM4SF1P30408 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.79■□□□□ 0.6
TM4SF1P30408 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.79■□□□□ 0.6
TM4SF1P30408 MEG3_2.1-201ENST00000611456 105 ntBASIC18.79■□□□□ 0.6
TM4SF1P30408 AP001065.2-201ENST00000617205 644 ntBASIC18.79■□□□□ 0.6
TM4SF1P30408 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF1P30408 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TM4SF1P30408 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.79■□□□□ 0.6
TM4SF1P30408 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF1P30408 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM4SF1P30408 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TM4SF1P30408 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.79■□□□□ 0.6
TM4SF1P30408 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 AC078875.1-201ENST00000431907 724 ntBASIC18.78■□□□□ 0.6
TM4SF1P30408 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.78■□□□□ 0.6
TM4SF1P30408 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.78■□□□□ 0.6
TM4SF1P30408 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.78■□□□□ 0.6
TM4SF1P30408 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 AC242376.2-201ENST00000619355 883 ntBASIC18.78■□□□□ 0.6
TM4SF1P30408 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 CYP2T1P-202ENST00000641596 2535 ntBASIC18.78■□□□□ 0.6
TM4SF1P30408 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.78■□□□□ 0.6
TM4SF1P30408 AP003680.1-201ENST00000598970 3660 ntBASIC18.78■□□□□ 0.6
TM4SF1P30408 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM4SF1P30408 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TM4SF1P30408 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TM4SF1P30408 KRT8P21-201ENST00000430398 1491 ntBASIC18.77■□□□□ 0.6
TM4SF1P30408 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TM4SF1P30408 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
TM4SF1P30408 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 AL139384.1-201ENST00000612143 3047 ntBASIC18.77■□□□□ 0.6
TM4SF1P30408 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF1P30408 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF1P30408 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF1P30408 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.77■□□□□ 0.6
TM4SF1P30408 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.77■□□□□ 0.6
TM4SF1P30408 AC130709.1-201ENST00000484779 1212 ntBASIC18.77■□□□□ 0.6
TM4SF1P30408 CTBP2P4-201ENST00000513884 920 ntBASIC18.77■□□□□ 0.6
TM4SF1P30408 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.77■□□□□ 0.6
TM4SF1P30408 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TM4SF1P30408 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TM4SF1P30408 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.77■□□□□ 0.6
TM4SF1P30408 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF1P30408 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM4SF1P30408 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.77■□□□□ 0.6
TM4SF1P30408 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TM4SF1P30408 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF1P30408 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF1P30408 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.77■□□□□ 0.59
TM4SF1P30408 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF1P30408 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM4SF1P30408 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TM4SF1P30408 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TM4SF1P30408 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 AC074138.1-201ENST00000611182 1303 ntBASIC18.76■□□□□ 0.59
TM4SF1P30408 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.76■□□□□ 0.59
TM4SF1P30408 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM4SF1P30408 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM4SF1P30408 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms