Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VTNP04004 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 CD8B2-202ENST00000417670 633 ntBASIC16.8■□□□□ 0.28
VTNP04004 HLA-K-203ENST00000430151 1046 ntBASIC16.8■□□□□ 0.28
VTNP04004 GOLGA2P4-201ENST00000441462 777 ntBASIC16.8■□□□□ 0.28
VTNP04004 PFN1P12-201ENST00000455938 534 ntBASIC16.8■□□□□ 0.28
VTNP04004 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.8■□□□□ 0.28
VTNP04004 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.8■□□□□ 0.28
VTNP04004 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.8■□□□□ 0.28
VTNP04004 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.8■□□□□ 0.28
VTNP04004 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
VTNP04004 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.8■□□□□ 0.28
VTNP04004 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.79■□□□□ 0.28
VTNP04004 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.79■□□□□ 0.28
VTNP04004 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 AC104457.1-201ENST00000401024 814 ntBASIC16.79■□□□□ 0.28
VTNP04004 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.79■□□□□ 0.28
VTNP04004 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 AC022616.1-201ENST00000518688 554 ntBASIC16.79■□□□□ 0.28
VTNP04004 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.79■□□□□ 0.28
VTNP04004 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
VTNP04004 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.79■□□□□ 0.28
VTNP04004 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.79■□□□□ 0.28
VTNP04004 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.79■□□□□ 0.28
VTNP04004 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VTNP04004 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VTNP04004 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
VTNP04004 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.79■□□□□ 0.28
VTNP04004 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VTNP04004 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.79■□□□□ 0.28
VTNP04004 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VTNP04004 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.78■□□□□ 0.28
VTNP04004 Z93015.1-201ENST00000451718 390 ntBASIC16.78■□□□□ 0.28
VTNP04004 AC099548.2-209ENST00000480264 625 ntBASIC16.78■□□□□ 0.28
VTNP04004 AP006547.1-201ENST00000563435 692 ntBASIC16.78■□□□□ 0.28
VTNP04004 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.78■□□□□ 0.28
VTNP04004 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.78■□□□□ 0.28
VTNP04004 MIR6787-201ENST00000616675 61 ntBASIC16.78■□□□□ 0.28
VTNP04004 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 AC055811.4-201ENST00000624039 1754 ntBASIC16.78■□□□□ 0.28
VTNP04004 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VTNP04004 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VTNP04004 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms