Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 AC066615.1-201ENST00000640911 628 ntBASIC11.35□□□□□ -0.59
SMKR1H3BMG3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 AC089987.1-201ENST00000551654 2209 ntBASIC11.35□□□□□ -0.59
SMKR1H3BMG3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 MBLAC2-202ENST00000514906 1936 ntBASIC11.35□□□□□ -0.59
SMKR1H3BMG3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SMKR1H3BMG3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 COL6A4P2-202ENST00000504443 2753 ntBASIC11.34□□□□□ -0.59
SMKR1H3BMG3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 AL009183.1-201ENST00000603760 355 ntBASIC11.34□□□□□ -0.59
SMKR1H3BMG3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SMKR1H3BMG3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.33□□□□□ -0.59
SMKR1H3BMG3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SMKR1H3BMG3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.33□□□□□ -0.6
SMKR1H3BMG3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms