Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 HLA-V-201ENST00000429037 534 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 KRT18P43-201ENST00000469825 1281 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AC104989.1-201ENST00000519711 778 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ENPP7P5-201ENST00000541031 1031 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 SNX29P1-201ENST00000548357 1007 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AC120045.2-201ENST00000567334 178 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 MIR5189-201ENST00000577370 114 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AL022328.1-201ENST00000610050 478 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AC092127.1-201ENST00000567093 3455 ntBASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA2E9PIF3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
NPIPA2E9PIF3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPA2E9PIF3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.08□□□□□ -0.15
NPIPA2E9PIF3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NPIPA2E9PIF3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 BCRP2-202ENST00000447763 634 ntBASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 BCRP6-201ENST00000510112 632 ntBASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 BCRP7-201ENST00000511549 544 ntBASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 AC124283.3-201ENST00000570869 594 ntBASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 COX11-210ENST00000639671 696 ntBASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NPIPA2E9PIF3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NPIPA2E9PIF3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms