Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC098614.1-201ENST00000368528 745 ntBASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AP006294.1-201ENST00000415407 339 ntBASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 API5-211ENST00000534695 560 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SRD5A3P1-201ENST00000603021 949 ntBASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL136982.4-201ENST00000437689 1740 ntBASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC138969.3-201ENST00000546612 1459 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC138932.2-201ENST00000548268 1459 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC126755.4-201ENST00000549796 1459 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC01101-201ENST00000622953 1884 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC004987.2-201ENST00000395959 1148 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC011495.1-201ENST00000498085 584 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC055876.2-201ENST00000531834 546 ntBASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TCRBV4S1A1TA0A5B7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms