Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AL662844.1-201ENST00000546340 181 ntBASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AC113367.3-201ENST00000508316 1912 ntBASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 AC005840.4-201ENST00000541242 2494 ntBASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D4Q9Y2X8 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 AC006504.5-208ENST00000588784 2401 ntBASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D4Q9Y2X8 HSPA7-201ENST00000445535 1927 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms