Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC006449.5-201ENST00000610658 2098 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 RPL13AP19-201ENST00000434320 584 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC019193.1-201ENST00000506678 823 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 NPM1P43-201ENST00000558669 786 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC013355.1-201ENST00000562625 723 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AP001065.2-201ENST00000617205 644 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AL023803.2-201ENST00000620080 638 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AL805961.1-203ENST00000641078 1258 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC008894.3-201ENST00000624324 3103 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 LRRC59-203ENST00000576448 1531 ntBASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.26■□□□□ 0.03
NCDNQ9UBB6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 RNU1-114P-201ENST00000365297 166 ntBASIC15.25■□□□□ 0.03
NCDNQ9UBB6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AL133267.1-201ENST00000398220 340 ntBASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AC006335.1-201ENST00000445200 547 ntBASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AC114812.1-204ENST00000449669 728 ntBASIC15.25■□□□□ 0.03
NCDNQ9UBB6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NCDNQ9UBB6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 237 ms