Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 MIR574-201ENST00000385209 96 ntBASIC13.13□□□□□ -0.31
CLCC1Q96S66 HAUS4P1-201ENST00000406739 1145 ntBASIC13.13□□□□□ -0.31
CLCC1Q96S66 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 MIR3909-201ENST00000579518 119 ntBASIC13.13□□□□□ -0.31
CLCC1Q96S66 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.13□□□□□ -0.31
CLCC1Q96S66 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLCC1Q96S66 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CLCC1Q96S66 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 AC002056.1-201ENST00000395613 760 ntBASIC13.12□□□□□ -0.31
CLCC1Q96S66 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 AC112191.1-201ENST00000523689 701 ntBASIC13.12□□□□□ -0.31
CLCC1Q96S66 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 AC109635.5-201ENST00000533593 962 ntBASIC13.12□□□□□ -0.31
CLCC1Q96S66 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 AP002472.1-201ENST00000577490 586 ntBASIC13.12□□□□□ -0.31
CLCC1Q96S66 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 AL078644.1-201ENST00000609881 752 ntBASIC13.12□□□□□ -0.31
CLCC1Q96S66 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CLCC1Q96S66 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLCC1Q96S66 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 TMBIM7P-203ENST00000641617 1718 ntBASIC13.11□□□□□ -0.31
CLCC1Q96S66 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.11□□□□□ -0.31
CLCC1Q96S66 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLCC1Q96S66 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms