Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.33■□□□□ 0.21
ALPK3Q96L96 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.33■□□□□ 0.21
ALPK3Q96L96 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ALPK3Q96L96 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 Z69890.1-201ENST00000382990 339 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 AL357373.1-201ENST00000394974 322 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 AQP7P5-201ENST00000428759 1049 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 AQP7P4-201ENST00000447083 1042 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 AQP7P2-201ENST00000453967 1041 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 ALG3P1-201ENST00000508806 1114 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 AC106047.2-201ENST00000511723 743 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.33■□□□□ 0.2
ALPK3Q96L96 AQP7P3-201ENST00000624547 1041 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 AC002044.2-201ENST00000624910 970 ntBASIC16.33■□□□□ 0.2
ALPK3Q96L96 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ALPK3Q96L96 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 BANF1P3-201ENST00000412556 261 ntBASIC16.32■□□□□ 0.2
ALPK3Q96L96 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 AC093752.3-201ENST00000567343 901 ntBASIC16.32■□□□□ 0.2
ALPK3Q96L96 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 AL139339.2-201ENST00000608063 657 ntBASIC16.32■□□□□ 0.2
ALPK3Q96L96 MIR6720-201ENST00000611664 98 ntBASIC16.32■□□□□ 0.2
ALPK3Q96L96 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 AC133540.1-201ENST00000620845 1019 ntBASIC16.32■□□□□ 0.2
ALPK3Q96L96 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ALPK3Q96L96 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.32■□□□□ 0.2
ALPK3Q96L96 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 PCDHB19P-201ENST00000570871 2371 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 XBP1P1-201ENST00000436573 652 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 BRI3P1-201ENST00000440440 378 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AP003398.1-201ENST00000531124 318 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AC007952.4-201ENST00000573866 637 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
ALPK3Q96L96 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AL118508.1-201ENST00000613502 2345 ntBASIC16.31■□□□□ 0.2
ALPK3Q96L96 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ALPK3Q96L96 AC106820.2-201ENST00000563775 3264 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms