Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 AP005019.2-201ENST00000615104 511 ntBASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 COX11-210ENST00000639671 696 ntBASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AC004066.1-201ENST00000502488 802 ntBASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AC119751.2-201ENST00000504529 210 ntBASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 AC244669.2-201ENST00000612320 853 ntBASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCN4BQ8IWT1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 AC090616.6-203ENST00000579186 1945 ntBASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 RNU1-114P-201ENST00000365297 166 ntBASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 AC016694.1-201ENST00000434179 700 ntBASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 MIR600HG-201ENST00000449175 5984 ntBASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.24■□□□□ 0.19
SCN4BQ8IWT1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 KRT8P35-201ENST00000483942 1338 ntBASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
SCN4BQ8IWT1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms