Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC069120.2-201ENST00000524091 540 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC025678.2-201ENST00000562061 970 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC010336.2-201ENST00000564226 506 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC051619.7-201ENST00000568314 623 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC093028.1-201ENST00000622998 982 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AL109936.8-201ENST00000641772 604 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CICP23-201ENST00000605013 2741 ntBASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC00346Q8IVM7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AC107890.1-201ENST00000422478 521 ntBASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AC027369.6-201ENST00000525520 931 ntBASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AC015910.1-201ENST00000579400 975 ntBASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
LINC00346Q8IVM7 AC023511.2-201ENST00000618803 211 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms