Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 REXO1L1P-202ENST00000608646 1974 ntBASIC14.36□□□□□ -0.11
TUBA1AQ71U36 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.36□□□□□ -0.11
TUBA1AQ71U36 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1AQ71U36 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TSEN15P1-201ENST00000423257 515 ntBASIC14.35□□□□□ -0.11
TUBA1AQ71U36 RBPMS2P1-201ENST00000437762 623 ntBASIC14.35□□□□□ -0.11
TUBA1AQ71U36 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AC092183.1-201ENST00000469884 875 ntBASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AC105233.2-201ENST00000523697 349 ntBASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AF228730.5-201ENST00000530288 346 ntBASIC14.35□□□□□ -0.11
TUBA1AQ71U36 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1AQ71U36 KRT18P28-201ENST00000453838 1332 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms