Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B3Q16720 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B3Q16720 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2B3Q16720 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B3Q16720 AC007787.1-201ENST00000588095 1583 ntBASIC18.89■□□□□ 0.61
ATP2B3Q16720 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B3Q16720 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B3Q16720 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 KLF2P2-201ENST00000416807 1039 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 AC016694.1-201ENST00000434179 700 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 RPS2P32-201ENST00000439199 892 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 RPL7P3-201ENST00000441388 714 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 AC004066.1-201ENST00000502488 802 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 AL645728.2-202ENST00000641679 227 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 KRT8P35-201ENST00000483942 1338 ntBASIC18.88■□□□□ 0.61
ATP2B3Q16720 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP2B3Q16720 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B3Q16720 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.87■□□□□ 0.61
ATP2B3Q16720 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AP000812.2-201ENST00000538934 718 ntBASIC18.87■□□□□ 0.61
ATP2B3Q16720 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.87■□□□□ 0.61
ATP2B3Q16720 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 PRSS30P-206ENST00000641773 873 ntBASIC18.87■□□□□ 0.61
ATP2B3Q16720 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2B3Q16720 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B3Q16720 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATP2B3Q16720 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.86■□□□□ 0.61
ATP2B3Q16720 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ATP2B3Q16720 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms