Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.34
COL11A1P12107 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL11A1P12107 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
COL11A1P12107 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.14■□□□□ 0.34
COL11A1P12107 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.14■□□□□ 0.34
COL11A1P12107 AL157407.1-201ENST00000435784 904 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.14■□□□□ 0.34
COL11A1P12107 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.14■□□□□ 0.34
COL11A1P12107 KLF2P1-201ENST00000447438 1042 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 AL596276.2-201ENST00000447525 331 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 TMEM198B-204ENST00000484016 896 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
COL11A1P12107 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.14■□□□□ 0.34
COL11A1P12107 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.34
COL11A1P12107 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.14■□□□□ 0.34
COL11A1P12107 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.14■□□□□ 0.34
COL11A1P12107 AC079336.7-201ENST00000623428 1078 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 AL162426.1-201ENST00000624141 743 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.14■□□□□ 0.34
COL11A1P12107 AL805961.1-203ENST00000641078 1258 ntBASIC17.14■□□□□ 0.34
COL11A1P12107 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 PPT1-215ENST00000641471 2368 ntBASIC17.14■□□□□ 0.33
COL11A1P12107 AC126365.1-201ENST00000578585 1514 ntBASIC17.14■□□□□ 0.33
COL11A1P12107 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.14■□□□□ 0.33
COL11A1P12107 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.14■□□□□ 0.33
COL11A1P12107 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 KRT8P21-201ENST00000430398 1491 ntBASIC17.14■□□□□ 0.33
COL11A1P12107 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.14■□□□□ 0.33
COL11A1P12107 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COL11A1P12107 RN7SL769P-201ENST00000469386 295 ntBASIC17.14■□□□□ 0.33
COL11A1P12107 AC021723.1-201ENST00000486306 515 ntBASIC17.14■□□□□ 0.33
COL11A1P12107 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
COL11A1P12107 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.14■□□□□ 0.33
COL11A1P12107 MIR3907-201ENST00000579424 151 ntBASIC17.14■□□□□ 0.33
COL11A1P12107 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.14■□□□□ 0.33
COL11A1P12107 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
COL11A1P12107 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
COL11A1P12107 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL11A1P12107 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.13■□□□□ 0.33
COL11A1P12107 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.13■□□□□ 0.33
COL11A1P12107 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 RN7SKP214-201ENST00000364208 315 ntBASIC17.13■□□□□ 0.33
COL11A1P12107 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.13■□□□□ 0.33
COL11A1P12107 RN7SL720P-201ENST00000488178 304 ntBASIC17.13■□□□□ 0.33
COL11A1P12107 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.13■□□□□ 0.33
COL11A1P12107 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
COL11A1P12107 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.13■□□□□ 0.33
COL11A1P12107 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
COL11A1P12107 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
COL11A1P12107 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.13■□□□□ 0.33
COL11A1P12107 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL11A1P12107 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.12■□□□□ 0.33
COL11A1P12107 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.12■□□□□ 0.33
COL11A1P12107 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 KRT8P29-201ENST00000420409 1371 ntBASIC17.12■□□□□ 0.33
COL11A1P12107 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
COL11A1P12107 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL11A1P12107 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.12■□□□□ 0.33
COL11A1P12107 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COL11A1P12107 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms