Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CLTAP09496 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.93■□□□□ 0.3
CLTAP09496 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLTAP09496 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 AC090616.6-203ENST00000579186 1945 ntBASIC16.92■□□□□ 0.3
CLTAP09496 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.92■□□□□ 0.3
CLTAP09496 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLTAP09496 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CLTAP09496 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CLTAP09496 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CLTAP09496 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.92■□□□□ 0.3
CLTAP09496 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.92■□□□□ 0.3
CLTAP09496 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 AL359711.2-201ENST00000563105 872 ntBASIC16.92■□□□□ 0.3
CLTAP09496 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 AL033527.5-201ENST00000641382 801 ntBASIC16.92■□□□□ 0.3
CLTAP09496 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 INTS4P2-202ENST00000614726 2019 ntBASIC16.92■□□□□ 0.3
CLTAP09496 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.92■□□□□ 0.3
CLTAP09496 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLTAP09496 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.92■□□□□ 0.3
CLTAP09496 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.92■□□□□ 0.3
CLTAP09496 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.91■□□□□ 0.3
CLTAP09496 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CLTAP09496 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 INE1-201ENST00000456273 945 ntBASIC16.91■□□□□ 0.3
CLTAP09496 AC026410.3-201ENST00000514280 936 ntBASIC16.91■□□□□ 0.3
CLTAP09496 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 AC120045.2-201ENST00000567334 178 ntBASIC16.91■□□□□ 0.3
CLTAP09496 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.91■□□□□ 0.3
CLTAP09496 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.91■□□□□ 0.3
CLTAP09496 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLTAP09496 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLTAP09496 AC067930.6-201ENST00000623257 4947 ntBASIC16.91■□□□□ 0.3
CLTAP09496 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms