Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.58■□□□□ 0.08
RETP07949 FAM197Y7-201ENST00000432892 766 ntBASIC15.58■□□□□ 0.08
RETP07949 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.58■□□□□ 0.08
RETP07949 HOMER2P2-201ENST00000451621 847 ntBASIC15.58■□□□□ 0.08
RETP07949 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.58■□□□□ 0.08
RETP07949 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.58■□□□□ 0.08
RETP07949 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.58■□□□□ 0.08
RETP07949 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 AC078819.1-201ENST00000547454 765 ntBASIC15.58■□□□□ 0.08
RETP07949 AC012085.1-201ENST00000548270 765 ntBASIC15.58■□□□□ 0.08
RETP07949 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.58■□□□□ 0.08
RETP07949 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.58■□□□□ 0.08
RETP07949 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.58■□□□□ 0.08
RETP07949 EEF1DP1-201ENST00000585891 896 ntBASIC15.58■□□□□ 0.08
RETP07949 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
RETP07949 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RETP07949 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.58■□□□□ 0.08
RETP07949 REXO1L8P-201ENST00000604378 1897 ntBASIC15.58■□□□□ 0.08
RETP07949 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RETP07949 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.57■□□□□ 0.08
RETP07949 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RETP07949 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.57■□□□□ 0.08
RETP07949 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.57■□□□□ 0.08
RETP07949 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
RETP07949 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.57■□□□□ 0.08
RETP07949 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.57■□□□□ 0.08
RETP07949 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.57■□□□□ 0.08
RETP07949 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.57■□□□□ 0.08
RETP07949 RPSAP36-202ENST00000494591 1261 ntBASIC15.57■□□□□ 0.08
RETP07949 SLED1-202ENST00000512051 380 ntBASIC15.57■□□□□ 0.08
RETP07949 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.57■□□□□ 0.08
RETP07949 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.57■□□□□ 0.08
RETP07949 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
RETP07949 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RETP07949 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
RETP07949 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RETP07949 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RETP07949 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms