Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SNX4O95219 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.62□□□□□ -0.07
SNX4O95219 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SNX4O95219 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SNX4O95219 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SNX4O95219 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SNX4O95219 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 AC069224.1-201ENST00000566372 1715 ntBASIC14.61□□□□□ -0.07
SNX4O95219 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SNX4O95219 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.61□□□□□ -0.07
SNX4O95219 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.61□□□□□ -0.07
SNX4O95219 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.61□□□□□ -0.07
SNX4O95219 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.61□□□□□ -0.07
SNX4O95219 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 AL512361.1-201ENST00000554200 418 ntBASIC14.61□□□□□ -0.07
SNX4O95219 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.61□□□□□ -0.07
SNX4O95219 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.61□□□□□ -0.07
SNX4O95219 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.61□□□□□ -0.07
SNX4O95219 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.61□□□□□ -0.07
SNX4O95219 CICP23-201ENST00000605013 2741 ntBASIC14.61□□□□□ -0.07
SNX4O95219 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.61□□□□□ -0.07
SNX4O95219 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNX4O95219 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 BNIP3P1-202ENST00000550043 1585 ntBASIC14.6□□□□□ -0.07
SNX4O95219 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNX4O95219 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNX4O95219 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNX4O95219 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
SNX4O95219 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.6□□□□□ -0.07
SNX4O95219 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX4O95219 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX4O95219 AC009407.1-201ENST00000568958 598 ntBASIC14.6□□□□□ -0.07
SNX4O95219 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX4O95219 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.6□□□□□ -0.07
SNX4O95219 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.6□□□□□ -0.07
SNX4O95219 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.6□□□□□ -0.07
SNX4O95219 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNX4O95219 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms