Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ATP2A1O14983 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP2A1O14983 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ATP2A1O14983 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 AC015818.8-201ENST00000587907 1519 ntBASIC17.59■□□□□ 0.41
ATP2A1O14983 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 BTBD6P1-201ENST00000412176 1267 ntBASIC17.59■□□□□ 0.41
ATP2A1O14983 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP2A1O14983 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 EIF3FP3-201ENST00000434851 1086 ntBASIC17.59■□□□□ 0.41
ATP2A1O14983 CNN2P10-201ENST00000443067 918 ntBASIC17.59■□□□□ 0.41
ATP2A1O14983 KRT8P13-201ENST00000463294 1010 ntBASIC17.59■□□□□ 0.41
ATP2A1O14983 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP2A1O14983 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A1O14983 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.59■□□□□ 0.41
ATP2A1O14983 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.59■□□□□ 0.41
ATP2A1O14983 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 AL606495.2-201ENST00000605867 535 ntBASIC17.59■□□□□ 0.41
ATP2A1O14983 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP2A1O14983 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.59■□□□□ 0.41
ATP2A1O14983 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.59■□□□□ 0.41
ATP2A1O14983 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ATP2A1O14983 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A1O14983 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.58■□□□□ 0.41
ATP2A1O14983 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.58■□□□□ 0.41
ATP2A1O14983 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A1O14983 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A1O14983 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP2A1O14983 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A1O14983 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A1O14983 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A1O14983 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP2A1O14983 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ATP2A1O14983 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP2A1O14983 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP2A1O14983 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP2A1O14983 AC099548.2-209ENST00000480264 625 ntBASIC17.58■□□□□ 0.4
ATP2A1O14983 RPSAP36-202ENST00000494591 1261 ntBASIC17.58■□□□□ 0.4
ATP2A1O14983 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ATP2A1O14983 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP2A1O14983 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.58■□□□□ 0.4
ATP2A1O14983 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
ATP2A1O14983 MIR4741-201ENST00000579822 90 ntBASIC17.58■□□□□ 0.4
ATP2A1O14983 MIR3615-201ENST00000581999 87 ntBASIC17.58■□□□□ 0.4
ATP2A1O14983 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ATP2A1O14983 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A1O14983 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A1O14983 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATP2A1O14983 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP2A1O14983 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP2A1O14983 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC245100.3-201ENST00000441281 285 ntBASIC17.57■□□□□ 0.4
ATP2A1O14983 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP2A1O14983 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
ATP2A1O14983 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC243960.2-201ENST00000600996 747 ntBASIC17.57■□□□□ 0.4
ATP2A1O14983 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP2A1O14983 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP2A1O14983 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP2A1O14983 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms