Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 USP32P1-208ENST00000506594 1164 ntBASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 AP005482.1-201ENST00000563722 1273 ntBASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 MIR4259-201ENST00000584466 101 ntBASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 RPSAP52-203ENST00000622976 1023 ntBASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 AL121723.1-201ENST00000445194 1519 ntBASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NPIPA3F8WFD2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 HLA-V-201ENST00000429037 534 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 KRT18P43-201ENST00000469825 1281 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AC104989.1-201ENST00000519711 778 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ENPP7P5-201ENST00000541031 1031 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 PTP4A1P2-201ENST00000546033 454 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 SNX29P1-201ENST00000548357 1007 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AC120045.2-201ENST00000567334 178 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 MIR5189-201ENST00000577370 114 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AL022328.1-201ENST00000610050 478 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AC092127.1-201ENST00000567093 3455 ntBASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NPIPA3F8WFD2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
NPIPA3F8WFD2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms