Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AC011477.6-201ENST00000604980 1927 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 RN7SL828P-201ENST00000607615 303 ntBASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.67■□□□□ 0.58
DDX49Q9Y6V7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 FAM220BP-201ENST00000377689 816 ntBASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 AC105021.1-202ENST00000570572 669 ntBASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX49Q9Y6V7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 SPTLC1P1-201ENST00000447199 261 ntBASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 AC009477.1-201ENST00000452936 217 ntBASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 AL589739.1-201ENST00000607720 493 ntBASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 AC004840.1-201ENST00000636359 365 ntBASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX49Q9Y6V7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms