Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 AL133499.1-201ENST00000596207 608 ntBASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MTCL1Q9Y4B5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 FAM58BP-201ENST00000439056 645 ntBASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AC005740.2-201ENST00000511085 419 ntBASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 AL391005.1-201ENST00000623953 2435 ntBASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 DOC2GP-204ENST00000639052 2548 ntBASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MTCL1Q9Y4B5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 AL136301.1-201ENST00000615830 422 ntBASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 VDAC1P1-201ENST00000439229 848 ntBASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 AC012618.1-201ENST00000461223 412 ntBASIC15.74■□□□□ 0.11
MTCL1Q9Y4B5 RN7SL181P-201ENST00000462921 277 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms