Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 OR2I1P-209ENST00000641730 5365 ntBASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AC254562.1-201ENST00000417586 456 ntBASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AC243562.2-201ENST00000561247 970 ntBASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 AP3S2-216ENST00000617003 1561 ntBASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HHLA3Q9XRX5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AC136759.1-202ENST00000530858 2194 ntBASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 MYO15B-237ENST00000642007 4893 ntBASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AL627223.1-201ENST00000416693 442 ntBASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 ALG1L8P-201ENST00000533887 760 ntBASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 RARRES2P9-201ENST00000565168 469 ntBASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HHLA3Q9XRX5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms