Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 AL158070.2-201ENST00000623713 1621 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 AP005018.1-201ENST00000525475 301 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 ENPP7P5-201ENST00000541031 1031 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 BX539320.1-201ENST00000623759 877 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 CU634019.7-201ENST00000624153 1185 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 AC005252.2-201ENST00000624630 1141 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 FP236241.2-201ENST00000624906 1185 ntBASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 REXO1L2P-201ENST00000425429 2069 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 ZBED1P1-201ENST00000502364 1930 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC098614.1-201ENST00000368528 745 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AL645937.2-201ENST00000396808 931 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AP006294.1-201ENST00000415407 339 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AL162726.2-201ENST00000438986 1017 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AP001582.1-201ENST00000525856 295 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 CLUHP6-201ENST00000580789 941 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 PRSS30P-206ENST00000641773 873 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AC006058.4-201ENST00000624016 1670 ntBASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.75■□□□□ 0.59
ECHDC1Q9NTX5 AL360270.3-201ENST00000609118 1348 ntBASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 AL035633.1-201ENST00000406139 838 ntBASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 RN7SL692P-201ENST00000464677 288 ntBASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms