Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 MIR1247-201ENST00000408206 136 ntBASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AL031055.1-201ENST00000606362 631 ntBASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SCAF1Q9H7N4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 SLC25A24P2-201ENST00000415059 510 ntBASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AC079328.1-201ENST00000560358 952 ntBASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AC093525.8-201ENST00000624099 1342 ntBASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AC117489.1-201ENST00000625169 3217 ntBASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 AC008033.3-201ENST00000612531 1407 ntBASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SCAF1Q9H7N4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 IGHJ2P-201ENST00000454480 60 ntBASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SCAF1Q9H7N4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms