Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CNTNAP4Q9C0A0 AC024909.3-201ENST00000611513 2257 ntBASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.08■□□□□ 0.64
CNTNAP4Q9C0A0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 RN7SL258P-201ENST00000478664 300 ntBASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 POU5F1P2-201ENST00000521750 823 ntBASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 PGAM1P5-201ENST00000548011 764 ntBASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP4Q9C0A0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 PCDHA14-201ENST00000506751 2298 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 AC005962.1-201ENST00000584100 773 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 AC087045.2-201ENST00000606279 1003 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 AC092171.5-201ENST00000608012 942 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 MEG3_2.1-201ENST00000611456 105 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 NKILA-202ENST00000614771 2598 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 KRT8P21-201ENST00000430398 1491 ntBASIC19.06■□□□□ 0.64
CNTNAP4Q9C0A0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP4Q9C0A0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms