Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM5Q96HC4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM5Q96HC4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 AC007787.1-201ENST00000588095 1583 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 AL645937.2-201ENST00000396808 931 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 RNA5SP421-201ENST00000516864 134 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 AC004790.1-201ENST00000612686 536 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 AL662799.1-202ENST00000614205 422 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 AC093525.8-201ENST00000624099 1342 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 FER1L4-210ENST00000615531 5998 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM5Q96HC4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDLIM5Q96HC4 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.07■□□□□ 0
PDLIM5Q96HC4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC093214.1-201ENST00000511688 1107 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 TPRX2P-201ENST00000535362 881 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC023310.3-201ENST00000557027 670 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC100756.1-201ENST00000562736 682 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC138749.3-201ENST00000567691 622 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC099568.2-201ENST00000609194 695 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC116165.1-201ENST00000611806 668 ntBASIC15.06■□□□□ 0
PDLIM5Q96HC4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM5Q96HC4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM5Q96HC4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms