Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATP6V0A1Q93050 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AC004066.1-201ENST00000502488 802 ntBASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AP005019.2-201ENST00000615104 511 ntBASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AC020658.6-201ENST00000623564 1870 ntBASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATP6V0A1Q93050 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 NUS1P3-201ENST00000423502 862 ntBASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 KRT18P25-201ENST00000508931 1278 ntBASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP6V0A1Q93050 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 MIR6787-201ENST00000616675 61 ntBASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 AC007950.2-201ENST00000615045 2347 ntBASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ATP6V0A1Q93050 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms