Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.29□□□□□ -0.28
ABCA4P78363 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCA4P78363 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.29□□□□□ -0.28
ABCA4P78363 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ABCA4P78363 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.29□□□□□ -0.28
ABCA4P78363 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.29□□□□□ -0.28
ABCA4P78363 MAGEA5-201ENST00000446757 942 ntBASIC13.29□□□□□ -0.28
ABCA4P78363 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.29□□□□□ -0.28
ABCA4P78363 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCA4P78363 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCA4P78363 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.29□□□□□ -0.28
ABCA4P78363 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.29□□□□□ -0.28
ABCA4P78363 AL096828.3-201ENST00000615354 462 ntBASIC13.29□□□□□ -0.28
ABCA4P78363 MIR7845-201ENST00000618396 99 ntBASIC13.29□□□□□ -0.28
ABCA4P78363 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCA4P78363 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
ABCA4P78363 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCA4P78363 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ABCA4P78363 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.29□□□□□ -0.28
ABCA4P78363 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
ABCA4P78363 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.28□□□□□ -0.28
ABCA4P78363 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.28□□□□□ -0.28
ABCA4P78363 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.28□□□□□ -0.28
ABCA4P78363 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 CICP13-201ENST00000422015 2789 ntBASIC13.28□□□□□ -0.28
ABCA4P78363 AC018735.1-201ENST00000437208 1502 ntBASIC13.28□□□□□ -0.28
ABCA4P78363 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ABCA4P78363 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ABCA4P78363 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.28□□□□□ -0.28
ABCA4P78363 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCA4P78363 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ABCA4P78363 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCA4P78363 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.27□□□□□ -0.28
ABCA4P78363 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.27□□□□□ -0.28
ABCA4P78363 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.27□□□□□ -0.28
ABCA4P78363 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.27□□□□□ -0.28
ABCA4P78363 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
ABCA4P78363 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.27□□□□□ -0.28
ABCA4P78363 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 AP006547.1-201ENST00000563435 692 ntBASIC13.27□□□□□ -0.28
ABCA4P78363 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.27□□□□□ -0.28
ABCA4P78363 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.27□□□□□ -0.28
ABCA4P78363 U62317.3-201ENST00000608319 855 ntBASIC13.27□□□□□ -0.28
ABCA4P78363 PRSS30P-206ENST00000641773 873 ntBASIC13.27□□□□□ -0.28
ABCA4P78363 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ABCA4P78363 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms