Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.13□□□□□ -0.15
CENPAP49450 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.13□□□□□ -0.15
CENPAP49450 MIR4313-201ENST00000580760 101 ntBASIC14.13□□□□□ -0.15
CENPAP49450 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 AC003101.2-201ENST00000612557 442 ntBASIC14.13□□□□□ -0.15
CENPAP49450 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.13□□□□□ -0.15
CENPAP49450 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
CENPAP49450 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 AC126365.1-201ENST00000578585 1514 ntBASIC14.12□□□□□ -0.15
CENPAP49450 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 ELL2P1-201ENST00000413990 1906 ntBASIC14.12□□□□□ -0.15
CENPAP49450 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.12□□□□□ -0.15
CENPAP49450 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 AL353705.2-201ENST00000428243 662 ntBASIC14.12□□□□□ -0.15
CENPAP49450 DNAJB3-201ENST00000446806 729 ntBASIC14.12□□□□□ -0.15
CENPAP49450 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.12□□□□□ -0.15
CENPAP49450 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CENPAP49450 RARRES2P9-201ENST00000565168 469 ntBASIC14.12□□□□□ -0.15
CENPAP49450 MIR3687-2-201ENST00000577708 61 ntBASIC14.12□□□□□ -0.15
CENPAP49450 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.12□□□□□ -0.15
CENPAP49450 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.12□□□□□ -0.15
CENPAP49450 MIR3687-1-201ENST00000614492 61 ntBASIC14.12□□□□□ -0.15
CENPAP49450 AC084121.4-201ENST00000641598 221 ntBASIC14.12□□□□□ -0.15
CENPAP49450 AF228730.8-201ENST00000642140 221 ntBASIC14.12□□□□□ -0.15
CENPAP49450 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 AC127383.1-201ENST00000444697 1800 ntBASIC14.12□□□□□ -0.15
CENPAP49450 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.12□□□□□ -0.15
CENPAP49450 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 AC009090.5-201ENST00000624886 2285 ntBASIC14.12□□□□□ -0.15
CENPAP49450 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CENPAP49450 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CENPAP49450 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CENPAP49450 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CENPAP49450 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CENPAP49450 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms