Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.7■□□□□ 0.1
HADHAP40939 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.7■□□□□ 0.1
HADHAP40939 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
HADHAP40939 RPL13P2-201ENST00000440687 659 ntBASIC15.7■□□□□ 0.1
HADHAP40939 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 AC009477.1-201ENST00000452936 217 ntBASIC15.7■□□□□ 0.1
HADHAP40939 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.7■□□□□ 0.1
HADHAP40939 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.7■□□□□ 0.1
HADHAP40939 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.7■□□□□ 0.1
HADHAP40939 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HADHAP40939 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 AC044860.1-202ENST00000559481 777 ntBASIC15.7■□□□□ 0.1
HADHAP40939 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.7■□□□□ 0.1
HADHAP40939 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HADHAP40939 LINC02084-201ENST00000606069 1096 ntBASIC15.7■□□□□ 0.1
HADHAP40939 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HADHAP40939 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.7■□□□□ 0.1
HADHAP40939 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.69■□□□□ 0.1
HADHAP40939 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.69■□□□□ 0.1
HADHAP40939 FAM8A3P-201ENST00000427218 844 ntBASIC15.69■□□□□ 0.1
HADHAP40939 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 TIMM17BP1-201ENST00000545713 516 ntBASIC15.69■□□□□ 0.1
HADHAP40939 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 SPCS2P1-201ENST00000561636 679 ntBASIC15.69■□□□□ 0.1
HADHAP40939 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.69■□□□□ 0.1
HADHAP40939 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.69■□□□□ 0.1
HADHAP40939 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.69■□□□□ 0.1
HADHAP40939 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.69■□□□□ 0.1
HADHAP40939 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.69■□□□□ 0.1
HADHAP40939 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.69■□□□□ 0.1
HADHAP40939 AC013726.1-201ENST00000563747 2285 ntBASIC15.69■□□□□ 0.1
HADHAP40939 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HADHAP40939 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HADHAP40939 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.69■□□□□ 0.1
HADHAP40939 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.68■□□□□ 0.1
HADHAP40939 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 AC022144.1-201ENST00000602255 1580 ntBASIC15.68■□□□□ 0.1
HADHAP40939 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HADHAP40939 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.68■□□□□ 0.1
HADHAP40939 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.68■□□□□ 0.1
HADHAP40939 AL133267.1-201ENST00000398220 340 ntBASIC15.68■□□□□ 0.1
HADHAP40939 TOMM22P5-201ENST00000416399 439 ntBASIC15.68■□□□□ 0.1
HADHAP40939 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms