Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 MST1L-201ENST00000442552 2185 ntBASIC14.02□□□□□ -0.16
GDF1P27539 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GDF1P27539 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.02□□□□□ -0.16
GDF1P27539 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GDF1P27539 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.02□□□□□ -0.16
GDF1P27539 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GDF1P27539 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GDF1P27539 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.02□□□□□ -0.17
GDF1P27539 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
GDF1P27539 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
GDF1P27539 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.02□□□□□ -0.17
GDF1P27539 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 AC079776.1-201ENST00000401540 1152 ntBASIC14.02□□□□□ -0.17
GDF1P27539 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 BAATP1-201ENST00000412284 1225 ntBASIC14.02□□□□□ -0.17
GDF1P27539 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.02□□□□□ -0.17
GDF1P27539 BCRP2-202ENST00000447763 634 ntBASIC14.02□□□□□ -0.17
GDF1P27539 GAPDHP40-201ENST00000505218 1006 ntBASIC14.02□□□□□ -0.17
GDF1P27539 BCRP6-201ENST00000510112 632 ntBASIC14.02□□□□□ -0.17
GDF1P27539 BCRP7-201ENST00000511549 544 ntBASIC14.02□□□□□ -0.17
GDF1P27539 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.02□□□□□ -0.17
GDF1P27539 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.02□□□□□ -0.17
GDF1P27539 BX539320.1-201ENST00000623759 877 ntBASIC14.02□□□□□ -0.17
GDF1P27539 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
GDF1P27539 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.02□□□□□ -0.17
GDF1P27539 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.02□□□□□ -0.17
GDF1P27539 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.02□□□□□ -0.17
GDF1P27539 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
GDF1P27539 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GDF1P27539 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
GDF1P27539 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GDF1P27539 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
GDF1P27539 AC022188.1-201ENST00000620960 1664 ntBASIC14.01□□□□□ -0.17
GDF1P27539 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
GDF1P27539 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
GDF1P27539 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 AC009090.5-201ENST00000624886 2285 ntBASIC14.01□□□□□ -0.17
GDF1P27539 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 MIR658-201ENST00000385210 100 ntBASIC14.01□□□□□ -0.17
GDF1P27539 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GDF1P27539 BOLA2P3-201ENST00000404566 256 ntBASIC14.01□□□□□ -0.17
GDF1P27539 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 CROCCP4-201ENST00000457096 498 ntBASIC14.01□□□□□ -0.17
GDF1P27539 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 AC093433.1-201ENST00000458048 571 ntBASIC14.01□□□□□ -0.17
GDF1P27539 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 KRT18P25-201ENST00000508931 1278 ntBASIC14.01□□□□□ -0.17
GDF1P27539 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.01□□□□□ -0.17
GDF1P27539 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.01□□□□□ -0.17
GDF1P27539 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.01□□□□□ -0.17
GDF1P27539 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 AL512343.1-201ENST00000605837 169 ntBASIC14.01□□□□□ -0.17
GDF1P27539 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 MIR6805-201ENST00000615055 62 ntBASIC14.01□□□□□ -0.17
GDF1P27539 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.01□□□□□ -0.17
GDF1P27539 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
GDF1P27539 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.01□□□□□ -0.17
GDF1P27539 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GDF1P27539 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14□□□□□ -0.17
GDF1P27539 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms