Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.47■□□□□ 0.07
XRCC1P18887 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 AP005018.1-201ENST00000525475 301 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
XRCC1P18887 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
XRCC1P18887 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.47■□□□□ 0.07
XRCC1P18887 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.47■□□□□ 0.07
XRCC1P18887 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.47■□□□□ 0.07
XRCC1P18887 AC140912.1-201ENST00000577171 1054 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 AL450472.2-201ENST00000603663 1156 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 AC099568.2-201ENST00000609194 695 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.47■□□□□ 0.07
XRCC1P18887 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 AC007191.1-201ENST00000623179 2995 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 CICP4-201ENST00000447359 2812 ntBASIC15.47■□□□□ 0.07
XRCC1P18887 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
XRCC1P18887 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
XRCC1P18887 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
XRCC1P18887 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.46■□□□□ 0.07
XRCC1P18887 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 LINC00552-201ENST00000625151 2579 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
XRCC1P18887 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.46■□□□□ 0.07
XRCC1P18887 TARDBPP1-201ENST00000442013 1203 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 AL589987.1-201ENST00000453380 819 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.46■□□□□ 0.07
XRCC1P18887 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.46■□□□□ 0.07
XRCC1P18887 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.46■□□□□ 0.07
XRCC1P18887 AC055876.2-201ENST00000531834 546 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
XRCC1P18887 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
XRCC1P18887 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
XRCC1P18887 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 AC023310.3-201ENST00000557027 670 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.46■□□□□ 0.07
XRCC1P18887 AC100756.1-201ENST00000562736 682 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 AC138749.3-201ENST00000567691 622 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.46■□□□□ 0.07
XRCC1P18887 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 AC116165.1-201ENST00000611806 668 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.46■□□□□ 0.07
XRCC1P18887 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 AC011477.6-201ENST00000604980 1927 ntBASIC15.46■□□□□ 0.07
XRCC1P18887 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
XRCC1P18887 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
XRCC1P18887 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
XRCC1P18887 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.46■□□□□ 0.06
XRCC1P18887 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
XRCC1P18887 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
XRCC1P18887 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.45■□□□□ 0.06
XRCC1P18887 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.45■□□□□ 0.06
XRCC1P18887 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
XRCC1P18887 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
XRCC1P18887 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
XRCC1P18887 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
XRCC1P18887 LINC00528-201ENST00000600723 2160 ntBASIC15.45■□□□□ 0.06
XRCC1P18887 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.45■□□□□ 0.06
XRCC1P18887 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms