Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AC022494.1-201ENST00000466044 728 ntBASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AC106760.1-201ENST00000508690 800 ntBASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 KRT18P25-201ENST00000508931 1278 ntBASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AP001582.1-201ENST00000525856 295 ntBASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 RHOXF1P1-202ENST00000635473 501 ntBASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB40ALP0C0E4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 AC022532.1-201ENST00000624563 1728 ntBASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB40ALP0C0E4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ACTBP11-201ENST00000436287 1126 ntBASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AL355994.2-201ENST00000447882 704 ntBASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 KRT90P-201ENST00000549264 1064 ntBASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AC099063.4-201ENST00000641099 1602 ntBASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 AC023824.1-201ENST00000562945 2975 ntBASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 MSTO2P-201ENST00000314835 1709 ntBASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB40ALP0C0E4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 FAM86MP-201ENST00000340703 885 ntBASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40ALP0C0E4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms