Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.6■□□□□ 0.09
RETP07949 MIR4741-201ENST00000579822 90 ntBASIC15.6■□□□□ 0.09
RETP07949 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.6■□□□□ 0.09
RETP07949 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 AC138951.2-201ENST00000623455 1161 ntBASIC15.6■□□□□ 0.09
RETP07949 AC128714.1-201ENST00000637035 887 ntBASIC15.6■□□□□ 0.09
RETP07949 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RETP07949 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
RETP07949 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RETP07949 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 AC068418.2-201ENST00000577309 3703 ntBASIC15.6■□□□□ 0.09
RETP07949 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RETP07949 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.6■□□□□ 0.09
RETP07949 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RETP07949 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.6■□□□□ 0.09
RETP07949 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RETP07949 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 AC112504.1-201ENST00000623415 1841 ntBASIC15.59■□□□□ 0.09
RETP07949 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RETP07949 PCGF3-213ENST00000620529 1899 ntBASIC15.59■□□□□ 0.09
RETP07949 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RETP07949 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.59■□□□□ 0.09
RETP07949 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.59■□□□□ 0.09
RETP07949 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RETP07949 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RETP07949 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.59■□□□□ 0.09
RETP07949 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.59■□□□□ 0.09
RETP07949 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.59■□□□□ 0.09
RETP07949 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
RETP07949 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.59■□□□□ 0.09
RETP07949 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.59■□□□□ 0.09
RETP07949 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
RETP07949 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.59■□□□□ 0.09
RETP07949 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RETP07949 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.59■□□□□ 0.09
RETP07949 SPCS2P2-201ENST00000603270 608 ntBASIC15.59■□□□□ 0.09
RETP07949 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.59■□□□□ 0.09
RETP07949 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RETP07949 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.59■□□□□ 0.09
RETP07949 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.59■□□□□ 0.09
RETP07949 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RETP07949 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RETP07949 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.59■□□□□ 0.09
RETP07949 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.59■□□□□ 0.09
RETP07949 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RETP07949 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RETP07949 AC015818.8-201ENST00000587907 1519 ntBASIC15.58■□□□□ 0.09
RETP07949 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RETP07949 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
RETP07949 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RETP07949 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RETP07949 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RETP07949 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RETP07949 LINC02447-202ENST00000501888 2146 ntBASIC15.58■□□□□ 0.08
RETP07949 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.58■□□□□ 0.08
RETP07949 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RETP07949 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.58■□□□□ 0.08
RETP07949 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms