Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LHX6Q9UPM6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
LHX6Q9UPM6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LHX6Q9UPM6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LHX6Q9UPM6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AL589702.1-201ENST00000641229 1509 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AP003168.1-201ENST00000530091 307 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 MTCYBP28-201ENST00000566728 1132 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AL450472.2-201ENST00000603663 1156 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AL391069.4-201ENST00000609583 481 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 RN7SL736P-201ENST00000613111 269 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 AP002371.2-201ENST00000624450 503 ntBASIC14.82□□□□□ -0.04
LHX6Q9UPM6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LHX6Q9UPM6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 CNN2P8-201ENST00000421872 913 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AL139010.1-201ENST00000454878 894 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 RPSAP36-202ENST00000494591 1261 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 COX5BP1-201ENST00000507622 393 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC090568.1-201ENST00000509499 856 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC124283.3-201ENST00000570869 594 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC011458.1-201ENST00000604034 617 ntBASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LHX6Q9UPM6 AL139011.1-202ENST00000642063 584 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms