Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 AL138799.1-201ENST00000448213 1675 ntBASIC17.97■□□□□ 0.47
SLF1Q9BQI6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 AC126177.1-201ENST00000547829 2218 ntBASIC17.97■□□□□ 0.47
SLF1Q9BQI6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 KRT90P-201ENST00000549264 1064 ntBASIC17.97■□□□□ 0.47
SLF1Q9BQI6 AC023824.1-201ENST00000562945 2975 ntBASIC17.97■□□□□ 0.47
SLF1Q9BQI6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLF1Q9BQI6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 AP005019.2-201ENST00000615104 511 ntBASIC17.96■□□□□ 0.47
SLF1Q9BQI6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLF1Q9BQI6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.96■□□□□ 0.46
SLF1Q9BQI6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 PRAL-201ENST00000624952 3286 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 FAM86MP-201ENST00000340703 885 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 C2orf27AP3-201ENST00000434123 579 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 RNA5SP412-201ENST00000516234 123 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.95■□□□□ 0.46
SLF1Q9BQI6 AL354718.3-201ENST00000616414 581 ntBASIC17.95■□□□□ 0.46
SLF1Q9BQI6 CR382287.1-201ENST00000623954 586 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms