Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC093525.8-201ENST00000624099 1342 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AC134915.1-201ENST00000426461 574 ntBASIC13.6□□□□□ -0.23
TMEM54Q969K7 AL442647.2-201ENST00000429864 857 ntBASIC13.6□□□□□ -0.23
TMEM54Q969K7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 API5-211ENST00000534695 560 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AC092552.1-201ENST00000547243 906 ntBASIC13.6□□□□□ -0.23
TMEM54Q969K7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TMEM261P1-201ENST00000604899 340 ntBASIC13.6□□□□□ -0.23
TMEM54Q969K7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 INTS4P2-202ENST00000614726 2019 ntBASIC13.6□□□□□ -0.23
TMEM54Q969K7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 DBET-201ENST00000630918 3363 ntBASIC13.6□□□□□ -0.23
TMEM54Q969K7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM54Q969K7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM54Q969K7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 REXO1L2P-201ENST00000425429 2069 ntBASIC13.59□□□□□ -0.23
TMEM54Q969K7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM54Q969K7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM54Q969K7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.59□□□□□ -0.23
TMEM54Q969K7 AC098850.1-201ENST00000419919 790 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms