Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 AL589987.1-201ENST00000453380 819 ntBASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 INGX-202ENST00000489074 768 ntBASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 DOC2GP-202ENST00000514950 1163 ntBASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 AC011467.4-201ENST00000594891 528 ntBASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDRT4Q8N9R6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AC103702.1-201ENST00000548801 2630 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AC126755.1-201ENST00000525846 6405 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AC104457.1-201ENST00000401024 814 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 TPRX2P-201ENST00000535362 881 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ZBED1P1-201ENST00000502364 1930 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDRT4Q8N9R6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDRT4Q8N9R6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms