Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SIX5Q8N196 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.88■□□□□ 0.13
SIX5Q8N196 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.88■□□□□ 0.13
SIX5Q8N196 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SIX5Q8N196 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 CNN2P10-201ENST00000443067 918 ntBASIC15.88■□□□□ 0.13
SIX5Q8N196 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 COX5BP1-201ENST00000507622 393 ntBASIC15.88■□□□□ 0.13
SIX5Q8N196 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.88■□□□□ 0.13
SIX5Q8N196 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.88■□□□□ 0.13
SIX5Q8N196 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.88■□□□□ 0.13
SIX5Q8N196 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SIX5Q8N196 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIX5Q8N196 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 TPM3P8-201ENST00000330554 643 ntBASIC15.87■□□□□ 0.13
SIX5Q8N196 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SIX5Q8N196 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AC016700.1-201ENST00000429424 312 ntBASIC15.87■□□□□ 0.13
SIX5Q8N196 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.87■□□□□ 0.13
SIX5Q8N196 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AC097359.3-201ENST00000603982 1210 ntBASIC15.87■□□□□ 0.13
SIX5Q8N196 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 BX539320.1-201ENST00000623759 877 ntBASIC15.87■□□□□ 0.13
SIX5Q8N196 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.87■□□□□ 0.13
SIX5Q8N196 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.87■□□□□ 0.13
SIX5Q8N196 AC011676.5-201ENST00000624864 2660 ntBASIC15.87■□□□□ 0.13
SIX5Q8N196 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIX5Q8N196 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 AL138799.1-201ENST00000448213 1675 ntBASIC15.86■□□□□ 0.13
SIX5Q8N196 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 AL023775.1-201ENST00000454907 1746 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms