Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AC069218.1-201ENST00000435269 762 ntBASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AC020922.3-201ENST00000595064 547 ntBASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 PCDHA12-202ENST00000613593 2588 ntBASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.41■□□□□ 0.22
CNKSR3Q6P9H4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AD000864.1-201ENST00000624076 2295 ntBASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AC112504.1-201ENST00000623415 1841 ntBASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 FAM58BP-201ENST00000439056 645 ntBASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 AC018635.2-201ENST00000608625 364 ntBASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNKSR3Q6P9H4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 SHC1P1-201ENST00000425230 1745 ntBASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNKSR3Q6P9H4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms