Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 EEF1DP6-201ENST00000449232 372 ntBASIC15.03■□□□□ -0
LYSMD4Q5XG99 TUBB8P8-201ENST00000458717 1058 ntBASIC15.03■□□□□ -0
LYSMD4Q5XG99 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 RN7SL574P-201ENST00000581512 297 ntBASIC15.03■□□□□ -0
LYSMD4Q5XG99 RN7SL163P-201ENST00000583100 276 ntBASIC15.03■□□□□ -0
LYSMD4Q5XG99 MIR7845-201ENST00000618396 99 ntBASIC15.03■□□□□ -0
LYSMD4Q5XG99 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 AL805961.1-203ENST00000641078 1258 ntBASIC15.03■□□□□ -0
LYSMD4Q5XG99 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD4Q5XG99 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.03■□□□□ -0
LYSMD4Q5XG99 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 FER1L4-210ENST00000615531 5998 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 CLUHP2-201ENST00000426660 1303 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC104457.1-201ENST00000401024 814 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD4Q5XG99 ACTG1P2-201ENST00000415776 1125 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 ACTG1P11-201ENST00000425411 1125 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC012618.1-201ENST00000461223 412 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AL161670.2-201ENST00000557650 1227 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 MIR5572-201ENST00000583188 137 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 BNIP3P13-201ENST00000599968 566 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.02■□□□□ -0
LYSMD4Q5XG99 AC004923.1-202ENST00000642106 209 ntBASIC15.02■□□□□ -0
LYSMD4Q5XG99 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 AC080080.1-201ENST00000625121 2420 ntBASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LYSMD4Q5XG99 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD4Q5XG99 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms