Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 GAPDHP40-201ENST00000505218 1006 ntBASIC16.42■□□□□ 0.22
CACNA2D1P54289 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 AC107373.2-201ENST00000607735 490 ntBASIC16.42■□□□□ 0.22
CACNA2D1P54289 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 CU634019.7-201ENST00000624153 1185 ntBASIC16.42■□□□□ 0.22
CACNA2D1P54289 FP236241.2-201ENST00000624906 1185 ntBASIC16.42■□□□□ 0.22
CACNA2D1P54289 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.42■□□□□ 0.22
CACNA2D1P54289 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 KRT8P22-201ENST00000562317 1415 ntBASIC16.42■□□□□ 0.22
CACNA2D1P54289 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CACNA2D1P54289 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CACNA2D1P54289 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 C1QBPP1-201ENST00000400117 770 ntBASIC16.41■□□□□ 0.22
CACNA2D1P54289 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 AC008735.3-201ENST00000596646 500 ntBASIC16.41■□□□□ 0.22
CACNA2D1P54289 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 AC025181.2-201ENST00000606994 802 ntBASIC16.41■□□□□ 0.22
CACNA2D1P54289 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 AC005252.2-201ENST00000624630 1141 ntBASIC16.41■□□□□ 0.22
CACNA2D1P54289 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 MSTO2P-201ENST00000314835 1709 ntBASIC16.41■□□□□ 0.22
CACNA2D1P54289 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CACNA2D1P54289 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.41■□□□□ 0.22
CACNA2D1P54289 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms