Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.32■□□□□ 0.2
LHX1P48742 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 AL008721.1-201ENST00000609964 604 ntBASIC16.32■□□□□ 0.2
LHX1P48742 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.32■□□□□ 0.2
LHX1P48742 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 CICP11-201ENST00000434745 2827 ntBASIC16.32■□□□□ 0.2
LHX1P48742 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.32■□□□□ 0.2
LHX1P48742 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.32■□□□□ 0.2
LHX1P48742 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX1P48742 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 SSR4P1-203ENST00000599569 2260 ntBASIC16.31■□□□□ 0.2
LHX1P48742 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 PDIA3P1-201ENST00000471856 1510 ntBASIC16.31■□□□□ 0.2
LHX1P48742 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 PAUPAR-201ENST00000630360 2965 ntBASIC16.31■□□□□ 0.2
LHX1P48742 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 KRT8P14-201ENST00000414254 1442 ntBASIC16.31■□□□□ 0.2
LHX1P48742 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 KLF2P4-201ENST00000451959 1225 ntBASIC16.31■□□□□ 0.2
LHX1P48742 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
LHX1P48742 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 AC145423.3-201ENST00000615987 467 ntBASIC16.31■□□□□ 0.2
LHX1P48742 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LHX1P48742 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LHX1P48742 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX1P48742 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX1P48742 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX1P48742 MIR658-201ENST00000385210 100 ntBASIC16.3■□□□□ 0.2
LHX1P48742 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX1P48742 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX1P48742 AP000812.2-201ENST00000538934 718 ntBASIC16.3■□□□□ 0.2
LHX1P48742 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX1P48742 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 AC025279.2-201ENST00000569730 653 ntBASIC16.3■□□□□ 0.2
LHX1P48742 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX1P48742 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LHX1P48742 GNRHR2-203ENST00000581100 1187 ntBASIC16.3■□□□□ 0.2
LHX1P48742 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.3■□□□□ 0.2
LHX1P48742 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms