Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MTHFRP42898 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
MTHFRP42898 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
MTHFRP42898 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 KLF2P2-201ENST00000416807 1039 ntBASIC16.16■□□□□ 0.18
MTHFRP42898 AC079178.1-201ENST00000420915 656 ntBASIC16.16■□□□□ 0.18
MTHFRP42898 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 HSPB1P2-201ENST00000448722 546 ntBASIC16.16■□□□□ 0.18
MTHFRP42898 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.16■□□□□ 0.18
MTHFRP42898 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.16■□□□□ 0.18
MTHFRP42898 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 AL451050.2-201ENST00000606967 682 ntBASIC16.16■□□□□ 0.18
MTHFRP42898 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.16■□□□□ 0.18
MTHFRP42898 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MTHFRP42898 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MTHFRP42898 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 AC022188.1-201ENST00000620960 1664 ntBASIC16.15■□□□□ 0.18
MTHFRP42898 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MTHFRP42898 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 HINT2P1-201ENST00000419438 481 ntBASIC16.15■□□□□ 0.18
MTHFRP42898 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
MTHFRP42898 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.15■□□□□ 0.18
MTHFRP42898 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
MTHFRP42898 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.15■□□□□ 0.18
MTHFRP42898 MIR6727-201ENST00000620702 65 ntBASIC16.15■□□□□ 0.18
MTHFRP42898 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
MTHFRP42898 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 KRT8P19-201ENST00000551916 1455 ntBASIC16.15■□□□□ 0.18
MTHFRP42898 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
MTHFRP42898 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MTHFRP42898 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
MTHFRP42898 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
MTHFRP42898 AC018735.1-201ENST00000437208 1502 ntBASIC16.14■□□□□ 0.18
MTHFRP42898 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
MTHFRP42898 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MTHFRP42898 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.14■□□□□ 0.17
MTHFRP42898 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
MTHFRP42898 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.14■□□□□ 0.17
MTHFRP42898 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
MTHFRP42898 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MTHFRP42898 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MTHFRP42898 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MTHFRP42898 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MTHFRP42898 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.14■□□□□ 0.17
MTHFRP42898 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.14■□□□□ 0.17
MTHFRP42898 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.14■□□□□ 0.17
MTHFRP42898 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms