Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC006486.2-201ENST00000624246 2199 ntBASIC13.78□□□□□ -0.2
APOC1P02654 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
APOC1P02654 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC1P02654 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC1P02654 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC1P02654 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.78□□□□□ -0.2
APOC1P02654 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC1P02654 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.78□□□□□ -0.2
APOC1P02654 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 AC009093.7-201ENST00000623853 1223 ntBASIC13.78□□□□□ -0.2
APOC1P02654 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.78□□□□□ -0.2
APOC1P02654 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 AC013268.4-201ENST00000637413 2228 ntBASIC13.78□□□□□ -0.2
APOC1P02654 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
APOC1P02654 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
APOC1P02654 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
APOC1P02654 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC1P02654 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC1P02654 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.77□□□□□ -0.2
APOC1P02654 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
APOC1P02654 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
APOC1P02654 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOC1P02654 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOC1P02654 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
APOC1P02654 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
APOC1P02654 AC211486.1-202ENST00000416371 468 ntBASIC13.77□□□□□ -0.21
APOC1P02654 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 UPF3AP3-201ENST00000420996 769 ntBASIC13.77□□□□□ -0.21
APOC1P02654 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.77□□□□□ -0.21
APOC1P02654 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.77□□□□□ -0.21
APOC1P02654 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.77□□□□□ -0.21
APOC1P02654 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
APOC1P02654 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 AC023141.5-201ENST00000458585 616 ntBASIC13.77□□□□□ -0.21
APOC1P02654 SERBP1P3-201ENST00000459980 809 ntBASIC13.77□□□□□ -0.21
APOC1P02654 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
APOC1P02654 AC211476.1-201ENST00000503899 468 ntBASIC13.77□□□□□ -0.21
APOC1P02654 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.77□□□□□ -0.21
APOC1P02654 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
APOC1P02654 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms