Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AC026320.2-201ENST00000434379 478 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 PIN4P1-201ENST00000451079 396 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AC009884.2-201ENST00000603110 324 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 AC005632.3-201ENST00000605544 308 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 ALOX12P2-203ENST00000570921 1945 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AL008718.2-201ENST00000609206 1313 ntBASIC17.38■□□□□ 0.37
ALDH1A1P00352 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ALDH1A1P00352 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALDH1A1P00352 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 OR2K2-202ENST00000374428 1038 ntBASIC17.37■□□□□ 0.37
ALDH1A1P00352 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 AC012362.1-201ENST00000434906 739 ntBASIC17.37■□□□□ 0.37
ALDH1A1P00352 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 RBM8B-201ENST00000555532 525 ntBASIC17.37■□□□□ 0.37
ALDH1A1P00352 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 FAM90A7P-201ENST00000382628 1395 ntBASIC17.37■□□□□ 0.37
ALDH1A1P00352 FAM90A23P-201ENST00000400136 1395 ntBASIC17.37■□□□□ 0.37
ALDH1A1P00352 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 KRT8P21-201ENST00000430398 1491 ntBASIC17.37■□□□□ 0.37
ALDH1A1P00352 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALDH1A1P00352 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.37■□□□□ 0.37
ALDH1A1P00352 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 AC084364.1-201ENST00000551967 1556 ntBASIC17.36■□□□□ 0.37
ALDH1A1P00352 AP001094.4-201ENST00000579008 2176 ntBASIC17.36■□□□□ 0.37
ALDH1A1P00352 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 RPL8P2-201ENST00000430538 502 ntBASIC17.36■□□□□ 0.37
ALDH1A1P00352 AC078875.1-201ENST00000431907 724 ntBASIC17.36■□□□□ 0.37
ALDH1A1P00352 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 AL132780.4-201ENST00000624870 1135 ntBASIC17.36■□□□□ 0.37
ALDH1A1P00352 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ALDH1A1P00352 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALDH1A1P00352 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms