Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 BRI3BPP1-201ENST00000594224 787 ntBASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 AJ011931.1-201ENST00000618749 2492 ntBASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSER1Q9C0I3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 AC055876.2-201ENST00000531834 546 ntBASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 AL049840.4-201ENST00000602422 811 ntBASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 CICP24-201ENST00000605464 2705 ntBASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSER1Q9C0I3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC023824.1-201ENST00000562945 2975 ntBASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC007787.1-201ENST00000588095 1583 ntBASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC093525.8-201ENST00000624099 1342 ntBASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.28■□□□□ 0.36
CCSER1Q9C0I3 AC107373.2-201ENST00000607735 490 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms